Actions

SUM: Difference between revisions

From SpinozaWiki

Misc (talk | contribs)
Buck (talk | contribs)
No edit summary
 
(702 intermediate revisions by 19 users not shown)
Line 1: Line 1:
__FORCETOC__
__NOTOC__


===Spinoza Centre User Meeting schedule===
Spinoza User Meetings (SUM) consist of a combination of '''lectures from outstanding national and international scientists''' in the fields of cognition, neuroscience and neuroimaging, updates on '''ongoing projects at Spinoza''', and '''instructions''' on common procedures at Spinoza.


Meetings are on Tuesdays at 16.00h unless explicitly mentioned otherwise. See [[SUM#Speaker information|below]] for speaker information.
SUMs are '''Tuesdays from 16:00 to 17:00''' (Netherlands time) and everyone is welcome to attend. Meetings are in hybrid format, i.e. both in person and via Zoom.  
{|
 
| style="width: 10%; background-color: silver;" |'''Date'''
<!--
| style="width: 30%; background-color: silver;" |'''Speaker'''
<iframe src="https://calendar.google.com/calendar/embed?height=400&wkst=2&bgcolor=%23ffffff&ctz=Europe%2FAmsterdam&showNav=1&showPrint=0&showTabs=0&showCalendars=0&showTz=0&showTitle=0&mode=AGENDA&src=MGIxN2U0ZTcyZDkzZTUxNmQ2NmM4OTEwNGIyOWYxNGYyNGM2MjlkMGYxY2FjM2YzNGU3NTNhODI0NDk0MjQ3N0Bncm91cC5jYWxlbmRhci5nb29nbGUuY29t&color=%23616161" style="border:solid 1px #777" width="800" height="400" frameborder="0" scrolling="no"></iframe>
| style="width: 50%; background-color: silver;" |'''Title'''
-->
|-
| 23-05-2017
| Wynn Legon (University of Minnesota)
| Neuromodulation with transcranial focused ultrasound
|-
| 30-05-2017
|
| Potential project presentations (x2)
|-
| 06-06-2017
|
| Potential project presentations (x2)
|-
| 13-06-2017
|
| Potential project presentations (x2)
|-
| 20-06-2017
| Tessa van Doesum (SC)
|
|-
| TBA
| Wietske Zuiderbaan (UU, SC)
| Vision in context
|-
| TBA
| Zsuzsika Sjoerds (Leiden University)
| A dual-systems approach to reinforcement learning and computational modeling in psychiatry and risk factors
|}


Find the full 'fMRI for Dummies' schedule [http://goo.gl/dh0qBi here].
=== Upcoming events ===
<br>


===Speaker information===
* Keep in mind that the audience is diverse, ranging from MR physicists to psychologists and medical doctors. Most people have a background in neuroscience.
* A good presentation length is 30-45 minutes to allow for discussion afterwards.
* Presentations are shown on an LCD screen (ratio 16:9) via a USB wifi dongle.
* A laser pointer doesn't work on the screen, an old-fashioned pointing stick will be ordered
<br>


===Potential topics===
{|
* [http://biorxiv.org/content/early/2016/07/10/054262 Best Practices in Data Analysis and Sharing in Neuroimaging using MRI]
| style="width: 25%; background-color: silver;" |'''Date''' (Host)
* [http://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.1002506 A Practical Guide for Improving Transparency and Reproducibility in Neuroimaging Research]
| style="width: 75%; background-color: silver;" |'''Title and speaker'''
* [http://blogs.discovermagazine.com/neuroskeptic/2016/07/27/myth-human-adult-neurogenesis/#.V5shgM_RbqB Mythbusters: adult neurogenesis?]
* In vivo quality control at the SC
* [http://link.springer.com/article/10.1007/s11948-015-9684-7 Responsible Reporting: Neuroimaging News in the Age of Responsible Research and Innovation]
* [http://rstb.royalsocietypublishing.org/content/371/1705?current-issue=y Interpreting BOLD]
* [https://practicalfmri.blogspot.nl/ PractiCal fMRI blog]
<br>


===Past meetings===
{|
| style="width: 10%; background-color: silver;" |'''Date'''
| style="width: 30%; background-color: silver;" |'''Speaker'''
| style="width: 50%; background-color: silver;" |'''Title'''
|-
|-
| 02-05-2017
| <br>
| Ruth van Holst (AMC / Donders Institute, Nijmegen)
|- valign="top"
| Data quality check
| Many talks for this year are still...
| ''TBA''
|-
|-
| 18-04-2017
| <br>
| Luka Liebrand
|- valign="top"
| Diffusion tensor imaging
| 25-02-2025
| ''' A Needle in the Haystack: methods and applications for line-scanning fMRI''' <br> Jurjen Heij <br>''Spinoza Centre for Neuroimaging, Amsterdam & Department of Epileptology, UKB, Bonn''
|-
|-
| 11-04-2017
| <br>
| Jeroen Siero (SC, UMCU)
|- valign="top"
| Laminar fMRI: what can the time domain tell us?
| 08-04-2025
| ''' MR of cardiovascular physiology''' <br> Ot Bakermans <br>''Amsterdam UMC, Amsterdam''
|-
|-
| 21-03-2017
| <br>
| Anouk Schrantee
|- valign="top"
| Resting-State fMRI analysis
| 22-04-2025
| ''' TBA''' <br> Amy Howard <br>''Imperial College, London''
|-
|-
| 14-03-2017
| <br>
| Julia Huntenburg (MPI Leipzig)
|- valign="top"
| A Systematic Relationship Between Functional Connectivity and Intracortical Myelin in the Human Cerebral Cortex
| 06-05-2025
| ''' fMRI at laminar resolution - issues and workarounds ''' <br> Maria Guidi <br>''Enrico Fermi Research Center, Rome''
|-
|-
| 28-02-2017
| <br>
| Guido van Wingen (AMC, Psychiatry)
|- valign="top"
| Advanced Issues with 2nd-level Analysis
| 03-06-2025
| ''' fMRI in monkeys (of the non-human kind)''' <br> Sjoerd Murris <br>''Netherlands Institute for Neuroscience, Amsterdam''
|  
|-
|-
| 21-02-2017
| <br>
| Alessio Fracasso (SC, UMCU)
|- valign="top"
| 7T MRI laminar imaging pipelines
| 01-07-2025
| ''' The Other Side of the MR Spectrum: Why We’re Hitting It Low, Low, Low''' <br> Beatrice Lena <br>'' Leiden University Medical Center, Leiden''
|  
|-
|-
| 14-02-2017
|}
| Akhil Edadan, Chiara Bozzacchi
 
| fMRI for Dummies: Issues with Analysis & Interpretation
=== Past events ===
 
{|
| style="width: 25%; background-color: silver;" |'''Date''' (Host)
| style="width: 75%; background-color: silver;" |'''Title and speaker'''
|  
|-
|-
| 31-01-2017
| <br>
| Jeanne Leerssen & Chiara Bozzacchi
|- valign="top"
| fMRI for Dummies - Issues with Analysis & Interpretation
| 10-12-2024 (Wietske & Myrte)
| '''On the road towards 14T''' <br> Martijn Cloos <br>''Donders Centre for Cognitive Neuroimaging, Nijmegen''
|
|-
|-
| 24-01-2017
| <br>
| Aymen Ayaz
|- valign="top"
| Compressed Sensing: a promise for fast laminar imaging?
| 19-11-2024 (Ilona)
| '''Attention alters population tuning in human visual cortex''' <br> Sam Ling <br>''Boston University, USA''
|  
|-
|-
| 17-01-2017
| <br>
| Anouk van der Straten & Rosanne Govaart
|- valign="top"
| fMRI for Dummies - Study Design and Efficiency
| 12-11-2024 (Wietske & Myrte)
| '''SPECTROS: Neurometabolite and BOLD response during OCD Symptom Provocation at 7T''' <br> Chris Vriend <br>''Amsterdam UMC, Amsterdam''
|
|-
|-
| 03-01-2017
| <br>
| Renée Schluter & Michelle de Haan
|- valign="top" 
| fMRI for Dummies - 2nd level analysis: between-subject analysis
| 29-10-2024 (Wietske & Myrte)
| '''Functional Magnetic Resonance Spectroscopy: Tracking Neurometabolic Shifts in Response to Stimuli''' <br> Anouk Schrantee <br>''Amsterdam UMC, Amsterdam''
|
|-
|-
| 20-12-2016
| <br>
| Katy van Galen & Akhil Edadan
|- valign="top"
| fMRI for Dummies - 1st level analysis: basis functions, parametric modulation and correlated regressors
| 08-10-2024 (Ilona)
| '''Human V4 size predicts crowding distance''' <br> Jan Kurzawski <br>''Maastricht University, Maastricht''
|  
|-
|-
| 06-12-2016
| <br>
| Paul Zhutovsky & Jelle van Dijk
|- valign="top"
| fMRI for Dummies - 1st level analysis: design matrix, contrasts, General Linear Modelling
| 24-09-2024 @ 1PM (Myrte)
| '''Characterizing human brain vasculature in vivo using 7T MRI''' <br> Saskia Bollman <br>''University of Queensland, Australia''
|  
|-
|-
| 22-11-2016
 
| Carlien Roelofzen & Michelle Solleveld
| <br>
| fMRI for Dummies - T-tests, Anovas and Regression
|- valign="top"
| 11-06-2024 (Serge & Ilona)
| '''Experimental research on altered states''' <br> Michiel van Elk <br>''Leiden University, Leiden''
|  
|-
|-
| 15-11-2016
| <br>
| Jeroen Siero
|- valign="top"
| fMRI for Dummies - Basis of the BOLD signal
| 21-05-2024 (Wietske)
| '''Tracking millisecond time in the human brain: from sensory features extraction to perception''' <br> Domenica Bueti  <br>''International School for Advanced Studies - SISSA, Trieste, Italy''
|
|-
|-
| 25-10-2016
| <br>
| Casey Paquola & Oti Lakbila-Kamal
|- valign="top"
| fMRI for Dummies - Preprocessing: coregistration and spatial normalization
| 23-04-2024 (Myrte)
| '''Ultra-high field imaging of the little brain''' <br> Nikos Priovoulos <br>''Spinoza Centre for Neuroimaging, Amsterdam''
|  
|-
|-
| 11-10-2016
| <br>
| Karina Borja & Wieke van Leeuwen
|- valign="top"
| fMRI for Dummies - Preprocessing: realigning and unwarping
| 16-04-2024 (Ilona)
| '''We are agents, not observers: On the interdependence of perception, memory, and behavior''' <br> Matthias Nau <br>''Vrije Universiteit, Amsterdam''
|
|-
|-
| 04-10-2016
| <br>
| Alyssa Brewer (UC Irvine, USA)
|- valign="top"
| Cortical and Behavioral Visual Plasticity in Human: Adapting to Reversed Visual Input
| 28-11-2023 (Wietske)
| '''Studying human brain physiology and function in a naturalistic manner''' <br> Cesar Caballero-Gaudes <br>''BCBL, San Sebastian, Spain''
|
|-
|-
|
| <br>
| Brian Barton (UC Irvine, USA)
|- valign="top"
| fMRI of the rod scotoma: cortical rod pathways and implications for lesion measurements
| 29-09-2023 (Serge)
|
| '''7T Birthday mini-symposium''' <br> Peter Luijten '' UMCU''<br> Rainer Goebel ''Maastricht University''
|  
|-
|-
| 27-9-2016
| <br>
| Tim van Timmeren (AMC, Psychiatry)
|- valign="top"
| fMRI for Dummies - Introduction
| 20-06-2023 (Wietske)
| '''The Status of Imaging Biomarkers for Psychiatric Disease''' <br> Gabi Ende <br>''ZI Mannheim, Germany''
|
|-
|-
| 13-09-2016
| <br>
| Steven Scholte (UvA) / Guido van Wingen (FMG)
|- valign="top"
| Cluster failure in functional MRI?
| 09-05-2023 (Wietske & Bobby)  
| '''In vivo 31P MRS in the human brain: frontiers and innovations''' <br> Lijing Xin <br>''EPFL Lausanne, Switzerland''
|
|-
|-
| 19-07-2016
| <br>
| Ritu Bhandari (NIN)
|- valign="top"
| Evaluation of Multiband EPI for Task-based fMRI
| 25-04-2023 (Serge)
| '''Line-scanning MRI''' <br> Luisa Raimondo <br>''NIN & Spinoza''
|
|-
|-
| 12-07-2016
| <br>
| Bas Rokers (University of Wisconsin-Madison)
|- valign="top"
| Direction of binocular motion decoded from human visual cortex
| 14-03-2023 (Nikos)
| '''Cerebellar contribution to fear learning''' <br> Dagmar Timmann <br>''University Hospital Essen''
|
|-
|-
| 05-07-2016
| <br>
| Peter de Best (Hebrew University of Jerusalem)
|- valign="top"
| What we may learn about optic neuritis recovery from the changes in visual cortex population receptive field size
| 07-03-2023 (W&L with NIN) 
| '''Research culture''' <br> Karla Miller <br>''University of Oxford, UK''
|
|-
|-
| 21-06-2016
| <br>
| Dora Hermes (NYU)
|- valign="top"
| [[Media:Special Lecture Dora Hermes 21 June 2016.pdf|Neuronal synchrony and the relation between the BOLD response and the local field potential in human visual cortex]]<br>'''(note: lecture organized by and located at NIN!)'''
| 21-02-2023 (Serge)
| '''Multisensory processes across the lifespan: from core phenomena to clinical applications''' <br> Micah Murray <br>''CHUV Lausanne, Switzerland''
|
|-
|-
| 14-06-2016
| <br>
| Matthan Caan (AMC/SC)
|- valign="top"
| Compressed Sensing: the Need for Speed at 7T
| 14-02-2023 (Wietske)
| '''Accelerating beyond the sound limit''' <br> Thomas Roos <br>''UMCU, NL''
|
|-
|-
| 31-05-2016
| <br>
| Dimo Ivanov (Maastricht University)
|- valign="top"
| Developments and applications of quantitative functional and anatomical MRI at 7T
| 07-02-2023 (Tomas)
| '''BIDScoin: converseren to standard Brain Imaging Data Structure (BIDS)''' <br> Marcel Zwiers <br>''Donders Institute, NL''
|  
|-
|-
| 24-05-2016
| <br>
| Martijn Barendregt (UMC Utrecht)
|- valign="top"
| Probing the cyclopean view of the world in human visual cortex
| 31-01-2023 (Wietske & Luisa)
|-
| '''How to scan 100,000 people: Brain imaging in UK Biobank''' <br> Karla Miller <br>''University of Oxford, UK''
| 03-05-2016
|
| Luka Liebrand (AMC)
| Diffusion-weighted-MRI-guided Nucleus Accumbens Deep Brain Stimulation?
|-
| 26-04-2016
| Tomas Knapen (VU)
| Negligible fronto-parietal BOLD activity accompanying unreportable switches in bistable perception
|-
| 19-04-2016
| Stefania Ferri / Guy Orban (University of Parma, Italy)
| Processing of observed actions in human Posterior Parietal Cortex
|-
| 05-04-2016
| Irene van Kalleveen (AMC/Spinoza)
| Phosphorus spectroscopy in the liver at 7 Tesla
|-
| 08-03-2016
| Peter Kok (Donders Institute, Nijmegen)
| Selective activation of the deep layers of the human primary visual cortex by top-down feedback
|-
| 01-03-2016
| Jeroen Siero (UMC Utrecht, soon also SC)
| Investigations of neurovascular coupling and vessel reactivity at 7T
|-
| 23-02-2016
| Marcel van Gerven (Radboud University, Nijmegen)
| [[Media:Seminar Marcel van Gerven 23 February 2016.pdf|Probing cortical representations with deep neural networks]]<br>'''(note: seminar organized by and located at NIN!)'''
|-
|-
| 16-02-2016
| <br>
| Rasim Boyacioglu (Donders Institute, Nijmegen)
|- valign="top"
| Fast acquisitions for (f)MRI
| 24-01-2023 (Nikos)
|-
| '''Computational models of working memory in the human and non-human primate brain''' <br> Jorge Mejias <br>''Swammerdam Institute for Life Sciences, Netherlands''
| 09-02-2016
| Wietske van der Zwaag and Pieter Buur (SC)
| Current developments at the Spinoza 7T
|-
| 02-02-2016
| Daniel Gallichan (EPFL, Lausanne)
| Imaging the brain at ultra-high resolution using 3D fat navigators (FatNavs)
|-
| 26-01-2016
| Collin Turbyne (AMC)
| The use of virtual and augmented reality in neuroscience
|-
| 05-01-2016 '''[15.00h!]'''
| Serge Dumoulin (SC)
| Visual neuroscience at 7T
|-
| 12-01-2016
| Anouk Schrantee (AMC, Radiology)
| The effect of exercise on neurogenesis, angiogenesis & cognition
|-
| 24-11-2015
| Mael Lebreton (UvA)
| Assessing inter-individual variability in brain-behavior relationship with functional neuroimaging
|-
| 17-11-2015
| Nico van den Berg (UMC Utrecht)
| MRSTAT: a 21st century solution to MRI.
|-
| 26-10-2015
| Pierre-Louis Bazin (MPI Leipzig)
| High resolution MR imaging of the human brain at 7 Tesla: promises for neuroscience, challenges for image computing
|-
| 23-06-2015
| Caroline Figueroa
|  
|  
|-
|-
| 16-06-2015
| <br>
| Martijn Mulder
|- valign="top"
| 17-01-2023 (Marco)
| '''Organization of Neuronal Activity Across the Brain''' <br> Matteo Carandini <br>''UCL, London, UK''
|  
|  
|-
|-
| 02-06-2015
| <br>
| Renée Visser
|- valign="top"
| “Optimizing study designs for single-trial multi-voxel pattern analysis: a systematic comparison”
| 10-1-2023 (Tomas)
|-
| '''New data-export procedures at Spinoza''' <br> Tomas Knapen <br>''Spinoza''
| 19-5-2015
|
| Tim van Timmeren
| Project proposal "Addiction: from goal-directed towards habitual control"
|}
|}
<br><br>
 
<br>
 
===Meeting information===
Zoom link: https://us02web.zoom.us/j/83685952269?pwd=cXJyL1Yrc2FCLzVRMjR0dUl5YUpNdz09
 
Meeting ID: 836 8595 2269 Password: 457022
 
For questions, ideas or comments, please email [mailto:info@spinozacentre.nl info].

Latest revision as of 11:23, 10 February 2025


Spinoza User Meetings (SUM) consist of a combination of lectures from outstanding national and international scientists in the fields of cognition, neuroscience and neuroimaging, updates on ongoing projects at Spinoza, and instructions on common procedures at Spinoza.

SUMs are Tuesdays from 16:00 to 17:00 (Netherlands time) and everyone is welcome to attend. Meetings are in hybrid format, i.e. both in person and via Zoom.


Upcoming events

Date (Host) Title and speaker

Many talks for this year are still... TBA

25-02-2025 A Needle in the Haystack: methods and applications for line-scanning fMRI
Jurjen Heij
Spinoza Centre for Neuroimaging, Amsterdam & Department of Epileptology, UKB, Bonn

08-04-2025 MR of cardiovascular physiology
Ot Bakermans
Amsterdam UMC, Amsterdam

22-04-2025 TBA
Amy Howard
Imperial College, London

06-05-2025 fMRI at laminar resolution - issues and workarounds
Maria Guidi
Enrico Fermi Research Center, Rome

03-06-2025 fMRI in monkeys (of the non-human kind)
Sjoerd Murris
Netherlands Institute for Neuroscience, Amsterdam

01-07-2025 The Other Side of the MR Spectrum: Why We’re Hitting It Low, Low, Low
Beatrice Lena
Leiden University Medical Center, Leiden

Past events

Date (Host) Title and speaker

10-12-2024 (Wietske & Myrte) On the road towards 14T
Martijn Cloos
Donders Centre for Cognitive Neuroimaging, Nijmegen

19-11-2024 (Ilona) Attention alters population tuning in human visual cortex
Sam Ling
Boston University, USA

12-11-2024 (Wietske & Myrte) SPECTROS: Neurometabolite and BOLD response during OCD Symptom Provocation at 7T
Chris Vriend
Amsterdam UMC, Amsterdam

29-10-2024 (Wietske & Myrte) Functional Magnetic Resonance Spectroscopy: Tracking Neurometabolic Shifts in Response to Stimuli
Anouk Schrantee
Amsterdam UMC, Amsterdam

08-10-2024 (Ilona) Human V4 size predicts crowding distance
Jan Kurzawski
Maastricht University, Maastricht

24-09-2024 @ 1PM (Myrte) Characterizing human brain vasculature in vivo using 7T MRI
Saskia Bollman
University of Queensland, Australia

11-06-2024 (Serge & Ilona) Experimental research on altered states
Michiel van Elk
Leiden University, Leiden

21-05-2024 (Wietske) Tracking millisecond time in the human brain: from sensory features extraction to perception
Domenica Bueti
International School for Advanced Studies - SISSA, Trieste, Italy

23-04-2024 (Myrte) Ultra-high field imaging of the little brain
Nikos Priovoulos
Spinoza Centre for Neuroimaging, Amsterdam

16-04-2024 (Ilona) We are agents, not observers: On the interdependence of perception, memory, and behavior
Matthias Nau
Vrije Universiteit, Amsterdam

28-11-2023 (Wietske) Studying human brain physiology and function in a naturalistic manner
Cesar Caballero-Gaudes
BCBL, San Sebastian, Spain

29-09-2023 (Serge) 7T Birthday mini-symposium
Peter Luijten UMCU
Rainer Goebel Maastricht University

20-06-2023 (Wietske) The Status of Imaging Biomarkers for Psychiatric Disease
Gabi Ende
ZI Mannheim, Germany

09-05-2023 (Wietske & Bobby) In vivo 31P MRS in the human brain: frontiers and innovations
Lijing Xin
EPFL Lausanne, Switzerland

25-04-2023 (Serge) Line-scanning MRI
Luisa Raimondo
NIN & Spinoza

14-03-2023 (Nikos) Cerebellar contribution to fear learning
Dagmar Timmann
University Hospital Essen

07-03-2023 (W&L with NIN) Research culture
Karla Miller
University of Oxford, UK

21-02-2023 (Serge) Multisensory processes across the lifespan: from core phenomena to clinical applications
Micah Murray
CHUV Lausanne, Switzerland

14-02-2023 (Wietske) Accelerating beyond the sound limit
Thomas Roos
UMCU, NL

07-02-2023 (Tomas) BIDScoin: converseren to standard Brain Imaging Data Structure (BIDS)
Marcel Zwiers
Donders Institute, NL

31-01-2023 (Wietske & Luisa) How to scan 100,000 people: Brain imaging in UK Biobank
Karla Miller
University of Oxford, UK

24-01-2023 (Nikos) Computational models of working memory in the human and non-human primate brain
Jorge Mejias
Swammerdam Institute for Life Sciences, Netherlands

17-01-2023 (Marco) Organization of Neuronal Activity Across the Brain
Matteo Carandini
UCL, London, UK

10-1-2023 (Tomas) New data-export procedures at Spinoza
Tomas Knapen
Spinoza


Meeting information

Zoom link: https://us02web.zoom.us/j/83685952269?pwd=cXJyL1Yrc2FCLzVRMjR0dUl5YUpNdz09

Meeting ID: 836 8595 2269 Password: 457022

For questions, ideas or comments, please email info.